STRING - Search Tool for the Retrieval of Interacting Genes/Proteins | Tool name | STRING - Search Tool for the Retrieval of Interacting Genes/Proteins |
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| URL | http://string.embl.de |
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| Important features | A database that predicts protein-interactions based on co-expression, genomic data, gene fusion. Also collects PPIs from multiple databases. Provides information on the function of interactions. Can also query with multiple genes/proteins. |
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| Citations | Snel B, Lehmann G, Bork P, Huynen MA. STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene. Nucleic Acids Res. 2000 Sep 15;28(18):3442-4. PubMed PMID: 10982861; PubMed Central PMCID: PMC110752. |
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| Year of publication | 2000 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | PPIs among given large scale gene expression data, Predicted PPIs based on co-expression, Predicted PPIs based on genomic data, Predicted PPIs based on gene fusion, PPIs and their rank based on evidence score, PPIs along with supporting evidences, Similar PPIs among species, PPIs collected from multiple PPI resources, PPIs of plants proteins |
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| Category | http://string.embl.de, A database that predicts protein-interactions based on co-expression, genomic data, gene fusion. Also collects PPIs from multiple databases. Provides information on the function of interactions. Can also query with multiple genes/proteins., Snel B, Lehmann G, Bork P, Huynen MA. STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene. Nucleic Acids Res. 2000 Sep 15;28(18):3442-4. PubMed PMID: 10982861; PubMed Central PMCID: PMC110752., 2000, 100 |
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| Online/downloadable | |
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| Online | Online |
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| Downloadable | |
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| Registration required | |
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| Free | Free |
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| Paid | |
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| Working status | Functional |
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| Function | PPIs along with their interaction sites |
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